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NMR solution structure of lanmodulin (LanM) complexed with yttrium(III) ions
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-13C NOESY aliphatic 1.26 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850 2 3D 1H-15N NOESY 1.14 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850 3 3D HNCACB 1.14 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850 4 3D CBCA(CO)NH 1.14 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850 5 3D HNCO 1.14 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850 6 3D HN(CA)CO 1.14 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850 7 3D HCCH-TOCSY 1.14 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850 8 3D H(CCO)NH 1.26 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850 9 2D 1H-15N HSQC 1.14 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850 10 2D 1H-13C HSQC 1.26 mM [U-99% 13C; U-99% 15N] Lanmodulin 90% H2O/10% D2O 46mM mM 7.0 1 atm 298 Bruker AVANCE III 850
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 850
NMR Refinement Method Details Software molecular dynamics NOE and TALOS restraints Amber
NMR Ensemble Information Conformer Selection Criteria structures with acceptable covalent geometry Conformers Calculated Total Number 12 Conformers Submitted Total Number 12 Representative Model 1 (minimized average structure)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 chemical shift assignment ARIA Linge, O'Donoghue and Nilges 4 peak picking Sparky Goddard 5 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 6 structure calculation Amber 14 Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman