6KXZ
HUMAN PARALLEL STRANDED 7-MER G-QUADRUPLEX COMPLEXED WITH 2 EPIRUBICIN (EPI) MOLECULES
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 1D | 1.11 mM (DT5)TAGGG(DT3), 2.22 mM Epirubicin | 90% H2O/10% D2O | 100 mM | 7.4 | 1 atm | 298 | Bruker AVANCE 500 |
2 | 2D 1H-1H NOESY | 1.11 mM (DT5)TAGGG(DT3), 2.22 mM Epirubicin | 90% H2O/10% D2O | 100 mM | 7.4 | 1 atm | 298 | Bruker AVANCE 500 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | Amber |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 35 |
Conformers Submitted Total Number | 15 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | Amber | CASE, DARDEN, CHEATHAM III, SIMMERLING, WANG, DUKE, LUO, ... AND KOLLMAN | |
2 | structure solution | TopSpin | 3.6 |