☰ Navigation Tabs
Human Carbonic Anhydrase II V143I variant 00 atm CO2
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3U7C
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 293 1.3 M sodium citrate, 100 mM Tris-HCl
Crystal Properties Matthews coefficient Solvent content 2.11 41.59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.209 α = 90 b = 41.316 β = 104.392 c = 72.177 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 270 2011-05-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE F1 0.9179 CHESS F1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.9 50 90 0.079 22.59 5.8 160412
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.9 0.92 0.456 2.65
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 3U7C 0.9 29.061 160206 7990 89.974 0.109 0.1081 0.1081 0.1214 0.1215 11.619
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 0.008 0.001 0.004
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 67.574 r_dihedral_angle_2_deg 34.807 r_dihedral_angle_4_deg 22.317 r_sphericity_bonded 12.939 r_dihedral_angle_3_deg 10.91 r_mcangle_it 10.406 r_mcangle_other 10.406 r_lrange_it 8.919 r_lrange_other 8.759 r_dihedral_angle_1_deg 7.124
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 67.574 r_dihedral_angle_2_deg 34.807 r_dihedral_angle_4_deg 22.317 r_sphericity_bonded 12.939 r_dihedral_angle_3_deg 10.91 r_mcangle_it 10.406 r_mcangle_other 10.406 r_lrange_it 8.919 r_lrange_other 8.759 r_dihedral_angle_1_deg 7.124 r_rigid_bond_restr 7.009 r_mcbond_it 6.803 r_mcbond_other 6.666 r_scangle_other 3.533 r_scangle_it 3.531 r_scbond_other 3.07 r_scbond_it 3.067 r_angle_refined_deg 2.763 r_angle_other_deg 1.67 r_symmetry_nbd_refined 0.383 r_nbd_other 0.336 r_nbd_refined 0.318 r_symmetry_xyhbond_nbd_refined 0.31 r_symmetry_nbd_other 0.209 r_xyhbond_nbd_refined 0.209 r_xyhbond_nbd_other 0.205 r_nbtor_refined 0.188 r_chiral_restr 0.171 r_symmetry_xyhbond_nbd_other 0.114 r_symmetry_nbtor_other 0.086 r_metal_ion_refined 0.071 r_bond_refined_d 0.034 r_gen_planes_refined 0.015 r_gen_planes_other 0.008 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2050 Nucleic Acid Atoms Solvent Atoms 353 Heterogen Atoms 11
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling REFMAC phasing