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The microtubule-binding domains of yeast cytoplasmic dynein in the high affinity state
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 90% H2O/10% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 2 2D 1H-13C HSQC aliphatic 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 100% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 3 2D 1H-13C HSQC aromatic 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 100% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 4 3D HNCACB 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 90% H2O/10% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 5 3D CBCA(CO)NH 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 90% H2O/10% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 6 3D HBHA(CO)NH 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 90% H2O/10% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 7 3D HCCH-COSY 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 100% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 8 3D HCCH-TOCSY 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 100% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 9 3D 1H-15N NOESY 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 90% H2O/10% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 10 3D 1H-13C NOESY 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 100% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800 11 3D 1H-13C NOESY aliphatic 0.75 mM [U-99% 13C; U-99% 15N] Cytoplasmic dynein 100% D2O 200 mM 7.0 1 atm 298 Bruker AVANCE III 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 800
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment Sparky Goddard 2 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 3 chemical shift assignment TALOS Cornilescu, Delaglio and Bax