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Solution structure of the chromodomain of yeast Eaf3
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 2 2D 1H-13C HSQC 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800 3 3D CBCANH 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 4 3D CBCA(CO)NH 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 5 3D HNCA 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 12 3D HN(CO)CA 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 10 3D HNCO 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 11 3D HN(CA)CO 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 9 3D HBHA(CO)NH 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 8 3D CC(CO)NH 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 500 7 3D H(CC)(CO)HN 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 500 6 3D HCCH-TOCSY 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800 22 3D HCCH-COSY 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 500 13 3D HNHA 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800 16 3D HNHB 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 15 3D HN(CO)HB 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 14 3D HNCG 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 17 3D HN(CO)CG 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 19 2D CGCBH 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800 23 2D CGCDH 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800 21 2D CGCEH 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800 20 2D HBCBCDHD 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800 18 2D HBCBCGCEHE 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800 25 2D DQF-COSY 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 24 2D 1H-1H TOCSY 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 600 27 3D 1H-15N NOESY 1.47 mM [U-13C,15N] Eaf3 90% H2O/10% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800 26 3D 1H-13C NOESY 1.47 mM [U-13C,15N] Eaf3 100% D2O 30 mM 6.8 1 atm 298 Bruker AVANCE 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 600 3 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 peak picking NMRView Johnson, One Moon Scientific 3 chemical shift assignment NMRView Johnson, One Moon Scientific 4 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 5 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 6 data analysis MOLMOL Koradi, Billeter and Wuthrich 8 data analysis PROCHECK / PROCHECK-NMR Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton