NMR Experiment |
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
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1 | 3D HNCO | 0.35 mM [U-100% 13C; U-100% 15N; U-80% 2H] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 850 |
2 | 3D HNCA | 0.35 mM [U-100% 13C; U-100% 15N; U-80% 2H] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 850 |
3 | 3D HN(CO)CA | 0.35 mM [U-100% 13C; U-100% 15N; U-80% 2H] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 850 |
4 | 3D HNCACB | 0.35 mM [U-100% 13C; U-100% 15N; U-80% 2H] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 850 |
5 | 2D 1H-15N HSQC | 0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 800 |
6 | 2D 1H-13C HSQC aliphatic | 0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 100% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 800 |
7 | 2D 1H-13C HSQC aromatic | 0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 100% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 800 |
8 | 3D 1H-13C NOESY aliphatic | 0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 100% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 900 |
9 | 3D 1H-13C NOESY aromatic | 0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 100% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 900 |
10 | 3D 1H-15N NOESY | 0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 900 |
15 | 3D HCCH-TOCSY | 0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 850 |
14 | 3D 1H-15N TOCSY | 0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Bruker AVANCE III 850 |
11 | 2D 1H-1H NOESY | 1 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Varian UNITY 600 |
12 | 2D 1H-1H TOCSY | 1 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Varian UNITY 600 |
13 | 2D DQF-COSY | 1 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 50 uM ZINC ION | 90% H2O/10% D2O | 150 mM | 7.5 | 1 atm | 293 | Varian UNITY 600 |