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Substrate/product bound Argininosuccinate lyase from Mycobacterium tuberculosis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 295 2.1M DL-malic acid pH 7.0, 10% v/v ethylene glycol
Crystal Properties Matthews coefficient Solvent content 2.73 54.95
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 114.18 α = 90 b = 131.35 β = 90 c = 145.04 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate 2018-01-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER AXS MICROSTAR 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 25.86 99.9 0.257 4.4 5.2 60527
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.85 100 0.812 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.7 25.86 57383 3056 99.81 0.24887 0.2465 0.2532 0.29295 0.2936 RANDOM 25.291
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.1 -0.72 -1.37
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.399 r_dihedral_angle_4_deg 17.287 r_dihedral_angle_3_deg 16.62 r_dihedral_angle_1_deg 5.947 r_long_range_B_refined 3.74 r_long_range_B_other 3.74 r_mcangle_it 1.986 r_mcangle_other 1.986 r_scangle_other 1.943 r_angle_refined_deg 1.338
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.399 r_dihedral_angle_4_deg 17.287 r_dihedral_angle_3_deg 16.62 r_dihedral_angle_1_deg 5.947 r_long_range_B_refined 3.74 r_long_range_B_other 3.74 r_mcangle_it 1.986 r_mcangle_other 1.986 r_scangle_other 1.943 r_angle_refined_deg 1.338 r_mcbond_it 1.151 r_mcbond_other 1.151 r_scbond_it 1.108 r_scbond_other 1.107 r_angle_other_deg 0.827 r_chiral_restr 0.067 r_bond_refined_d 0.009 r_bond_other_d 0.006 r_gen_planes_refined 0.005 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 12967 Nucleic Acid Atoms Solvent Atoms 293 Heterogen Atoms 107
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHENIX phasing