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CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 11
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6I10
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5 292 18-22% PEG 8000, 100-130 mM MgAc2, 100 mM citric acid pH 5.0
Crystal Properties Matthews coefficient Solvent content 2.52 51.19
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.18 α = 90 b = 92.37 β = 90 c = 97.39 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2015-04-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.9795 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.91 43.08 99.8 0.082 0.098 0.039 11.9 6.4 43448 32.427
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.91 1.96 99.8 1.252 1.511 0.603 1.5 6.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 6I10 1.91 43.08 41257 2136 99.71 0.205 0.203 0.201 0.2428 0.2384 RANDOM 42.721
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.66 1.49 0.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.629 r_dihedral_angle_4_deg 13.732 r_dihedral_angle_3_deg 12.187 r_dihedral_angle_1_deg 4.822 r_mcangle_it 2.615 r_mcbond_it 1.671 r_mcbond_other 1.669 r_angle_other_deg 1.589 r_angle_refined_deg 1.562 r_chiral_restr 0.103
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.629 r_dihedral_angle_4_deg 13.732 r_dihedral_angle_3_deg 12.187 r_dihedral_angle_1_deg 4.822 r_mcangle_it 2.615 r_mcbond_it 1.671 r_mcbond_other 1.669 r_angle_other_deg 1.589 r_angle_refined_deg 1.562 r_chiral_restr 0.103 r_bond_refined_d 0.013 r_gen_planes_other 0.009 r_gen_planes_refined 0.008 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3784 Nucleic Acid Atoms Solvent Atoms 174 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement xia2 data scaling PDB_EXTRACT data extraction xia2 data reduction