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ARBITRIUM PEPTIDE RECEPTOR FROM SPBETA PHAGE in complex with 43 mer DNA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 294 peg 400, hepes, magnesium chloride
Crystal Properties Matthews coefficient Solvent content 3.32 62.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 159.157 α = 90 b = 159.157 β = 90 c = 245.907 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2018-06-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALBA BEAMLINE XALOC 0.97948 ALBA XALOC
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 133.61 100 16.7 26.8 79845
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.32
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 133.61 75807 4007 99.95 0.21789 0.2164 0.24647 0.2338 RANDOM 55.708
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.56 1.56 -3.12
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.61 r_dihedral_angle_4_deg 21.062 r_dihedral_angle_3_deg 19.718 r_long_range_B_refined 7.843 r_dihedral_angle_1_deg 5.398 r_mcangle_it 3.396 r_scbond_it 2.895 r_mcbond_it 2.227 r_angle_refined_deg 1.754 r_chiral_restr 0.13
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.61 r_dihedral_angle_4_deg 21.062 r_dihedral_angle_3_deg 19.718 r_long_range_B_refined 7.843 r_dihedral_angle_1_deg 5.398 r_mcangle_it 3.396 r_scbond_it 2.895 r_mcbond_it 2.227 r_angle_refined_deg 1.754 r_chiral_restr 0.13 r_bond_refined_d 0.013 r_gen_planes_refined 0.009 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6366 Nucleic Acid Atoms 1763 Solvent Atoms 255 Heterogen Atoms 30
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling MOLREP phasing