6HNH
Peptide-membrane interaction between targeting and lysis
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | 10 mM peptide | trifluoroethanol/water | 0 mM | 5 | AMBIENT Pa | 291 | Bruker AvanceIII 500 |
2 | 2D 1H-13C HSQC | 10 mM peptide | trifluoroethanol/water | 0 mM | 5 | AMBIENT Pa | 291 | Bruker AvanceIII 500 |
3 | 2D DQF-COSY | 10 mM peptide | trifluoroethanol/water | 0 mM | 5 | AMBIENT Pa | 291 | Bruker AvanceIII 500 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AvanceIII | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | Amber |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 30 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | Amber | 3.97 | Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman |
3 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
4 | chemical shift assignment | Sparky | Goddard |