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Hsp90 co-chaperone Cns1 from Saccharomyces cerevisiae (delta69)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6HFM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 0.1 M Tris/HCl pH 8.5, 25% PEG3000
Crystal Properties Matthews coefficient Solvent content 2.49 50.65
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.78 α = 90 b = 50.78 β = 90 c = 283.07 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 16M 2017-03-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 0.97793 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 40 97.9 0.083 10.6 4.7 9753
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.9 99.8 0.613 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 6HFM 2.8 15 9187 484 97.05 0.26084 0.25931 0.28805 0.2929 RANDOM 87.546
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.04 -0.04 0.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.575 r_sphericity_free 20.22 r_dihedral_angle_3_deg 17.014 r_dihedral_angle_4_deg 10.602 r_dihedral_angle_1_deg 5.808 r_sphericity_bonded 4.622 r_long_range_B_refined 2.581 r_long_range_B_other 2.581 r_mcangle_it 2.397 r_mcangle_other 2.396
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.575 r_sphericity_free 20.22 r_dihedral_angle_3_deg 17.014 r_dihedral_angle_4_deg 10.602 r_dihedral_angle_1_deg 5.808 r_sphericity_bonded 4.622 r_long_range_B_refined 2.581 r_long_range_B_other 2.581 r_mcangle_it 2.397 r_mcangle_other 2.396 r_mcbond_other 1.765 r_mcbond_it 1.764 r_scangle_other 1.657 r_scbond_it 1.278 r_scbond_other 1.273 r_angle_refined_deg 1.058 r_angle_other_deg 0.875 r_rigid_bond_restr 0.336 r_chiral_restr 0.06 r_bond_refined_d 0.007 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2539 Nucleic Acid Atoms Solvent Atoms 11 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing