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Crystal structure of BauA, the Ferric preacinetobactin receptor from Acinetobacter baumannii
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 294 PEG 8000 Hepes KCl ethylene glycol
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 180.2 α = 90 b = 219.52 β = 99.21 c = 101.43 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2015-04-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.97949 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.83 57.24 99.7 0.049 17.1 3.8 339550
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.83 1.88 99.6 0.665 2.2 3.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.83 57.24 322409 17140 99.7 0.15659 0.15552 0.168 0.17662 0.1879 RANDOM 34.15
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.62 0.74 -0.88 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.46 r_dihedral_angle_4_deg 22.521 r_dihedral_angle_3_deg 11.447 r_long_range_B_refined 8.633 r_long_range_B_other 8.448 r_scangle_other 7.4 r_dihedral_angle_1_deg 7.045 r_scbond_it 5.62 r_scbond_other 5.615 r_mcangle_it 3.896
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.46 r_dihedral_angle_4_deg 22.521 r_dihedral_angle_3_deg 11.447 r_long_range_B_refined 8.633 r_long_range_B_other 8.448 r_scangle_other 7.4 r_dihedral_angle_1_deg 7.045 r_scbond_it 5.62 r_scbond_other 5.615 r_mcangle_it 3.896 r_mcangle_other 3.896 r_mcbond_it 3.31 r_mcbond_other 3.306 r_angle_refined_deg 1.16 r_angle_other_deg 0.917 r_chiral_restr 0.061 r_gen_planes_refined 0.014 r_bond_refined_d 0.008 r_gen_planes_other 0.002 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 15402 Nucleic Acid Atoms Solvent Atoms 1995 Heterogen Atoms 733
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing