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Crystal structure of BauA, the Ferric preacinetobactin receptor from Acinetobacter baumannii
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 PEG 8000, Hepes, KCl, ethylene glycol
Crystal Properties Matthews coefficient Solvent content 4.59 73.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 182.31 α = 90 b = 220.42 β = 98.65 c = 101.67 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2014-11-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.97957 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.54 139.53 99.9 0.12 19.3 15.2 130065
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.54 2.61 100 0.789 3.8 14.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.54 139.53 123580 6485 99.93 0.18483 0.18336 0.1931 0.21295 0.2197 RANDOM 43.41
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.25 1.26 -0.5 -0.13
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.784 r_dihedral_angle_4_deg 21.821 r_dihedral_angle_3_deg 14.675 r_dihedral_angle_1_deg 7.671 r_long_range_B_refined 5.496 r_long_range_B_other 5.492 r_scangle_other 4.058 r_scbond_it 2.758 r_scbond_other 2.758 r_mcangle_it 2.47
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.784 r_dihedral_angle_4_deg 21.821 r_dihedral_angle_3_deg 14.675 r_dihedral_angle_1_deg 7.671 r_long_range_B_refined 5.496 r_long_range_B_other 5.492 r_scangle_other 4.058 r_scbond_it 2.758 r_scbond_other 2.758 r_mcangle_it 2.47 r_mcangle_other 2.47 r_mcbond_it 1.569 r_mcbond_other 1.569 r_angle_refined_deg 1.239 r_angle_other_deg 0.622 r_chiral_restr 0.085 r_gen_planes_refined 0.014 r_bond_refined_d 0.01 r_gen_planes_other 0.001 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 15416 Nucleic Acid Atoms Solvent Atoms 303 Heterogen Atoms 202
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling Auto-Rickshaw phasing