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Crystal structure of UNC119 in complex with LCK peptide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 277 20% PEG 3350
200mM KH2PO4
Crystal Properties Matthews coefficient Solvent content 2.23 44.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.09 α = 90 b = 63.62 β = 90 c = 188.16 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2016-04-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.987 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 94.08 99.8 12.4 6.5 39393
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2 94.08 39393 2072 99.61 0.17298 0.17095 0.1811 0.2122 0.2164 RANDOM 32.557
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.73 0.02 -2.75
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.588 r_dihedral_angle_4_deg 18.285 r_dihedral_angle_3_deg 13.951 r_long_range_B_other 8.906 r_long_range_B_refined 8.904 r_dihedral_angle_1_deg 7.496 r_scangle_other 6.96 r_scbond_it 4.742 r_scbond_other 4.735 r_mcangle_it 4.059
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.588 r_dihedral_angle_4_deg 18.285 r_dihedral_angle_3_deg 13.951 r_long_range_B_other 8.906 r_long_range_B_refined 8.904 r_dihedral_angle_1_deg 7.496 r_scangle_other 6.96 r_scbond_it 4.742 r_scbond_other 4.735 r_mcangle_it 4.059 r_mcangle_other 4.059 r_mcbond_it 3.035 r_mcbond_other 3.035 r_angle_refined_deg 0.691 r_angle_other_deg 0.51 r_chiral_restr 0.064 r_bond_refined_d 0.01 r_bond_other_d 0.003 r_gen_planes_refined 0.003 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4206 Nucleic Acid Atoms Solvent Atoms 262 Heterogen Atoms 110
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling MOLREP phasing