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Solution structure of the capsid domain from the activity-regulated cytoskeleton-associated protein, Arc
SOLUTION NMR - SOLUTION SCATTERING
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Agilent DD2 800 2 3D HNCA 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Bruker AVANCE III 750 3 3D HN(CO)CA 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Bruker AVANCE III 750 4 3D HNCO 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Bruker AVANCE III 750 5 3D HN(CA)CO 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Bruker AVANCE III 750 6 3D CBCA(CO)NH 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Bruker AVANCE III 750 7 3D HNCACB 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Bruker AVANCE III 750 8 3D 1H-15N TOCSY 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Agilent DD2 800 9 3D HCCH-TOCSY 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Agilent DD2 800 10 3D 1H-15N NOESY 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Agilent DD2 800 11 3D 1H-13C NOESY 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Agilent DD2 800 12 3D 1H-13C TOCSY aromatic 1 mM [U-13C; U-15N] Arc 90% H2O/10% D2O 50 mM 7.4 1 bar 298 Agilent DD2 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 2 Bruker AVANCE III 750 3 Agilent DD2 800
NMR Refinement Method Details Software simulated annealing Xplor-NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 2 refinement Xplor-NIH Schwieters, Kuszewski, Tjandra and Clore 3 chemical shift assignment CcpNmr Analysis CCPN