☰ Navigation Tabs
Solution structure of FUS-ZnF bound to UGGUG
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-13C NOESY aliphatic 0.8 mM [U-99% 13C; U-99% 15N] FUS-ZnF, 1.0 mM RNA (5'-R(*UP*GP*GP*UP*G)-3'), 20 mM sodium phosphate, 1 mM beta-mercaptoethanol 90% H2O/10% D2O 20 mM 6.5 AMBIENT Pa 303 Bruker AVANCE 900 2 3D 1H-15N NOESY 0.8 mM [U-99% 13C; U-99% 15N] FUS-ZnF, 1.0 mM RNA (5'-R(*UP*GP*GP*UP*G)-3'), 20 mM sodium phosphate, 1 mM beta-mercaptoethanol 90% H2O/10% D2O 20 mM 6.5 AMBIENT Pa 303 Bruker AVANCE 900 3 2D 1H-1H NOESY 1.0 mM [U-99% 13C; U-99% 15N] FUS-ZnF, 0.9 mM RNA (5'-R(*UP*GP*GP*UP*G)-3'), 20 mM sodium phosphate, 1 mM beta-mercaptoethanol 100% D2O 20 mM 6.5 AMBIENT Pa 303 Bruker AVANCE 900 4 2D 13C F2-filtered NOESY 0.8 mM [U-99% 13C; U-99% 15N] FUS-ZnF, 1.0 mM RNA (5'-R(*UP*GP*GP*UP*G)-3'), 20 mM sodium phosphate, 1 mM beta-mercaptoethanol 100% D2O 20 mM 6.5 AMBIENT Pa 303 Bruker AVANCE III 600 5 2D 1H-13C HSQC aliphatic 1.0 mM [U-99% 13C; U-99% 15N] FUS-ZnF, 0.9 mM RNA (5'-R(*UP*GP*GP*UP*G)-3'), 20 mM sodium phosphate, 1 mM beta-mercaptoethanol 100% D2O 20 mM 6.5 AMBIENT Pa 303 Bruker AVANCE III 700 6 2D 1H-13C HSQC aromatic 1.0 mM [U-99% 13C; U-99% 15N] FUS-ZnF, 0.9 mM RNA (5'-R(*UP*GP*GP*UP*G)-3'), 20 mM sodium phosphate, 1 mM beta-mercaptoethanol 100% D2O 20 mM 6.5 AMBIENT Pa 303 Bruker AVANCE III 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900 2 Bruker AVANCE III 700 3 Bruker AVANCE III 600
NMR Refinement Method Details Software simulated annealing Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 500 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details NULL
Computation: NMR Software # Classification Version Software Name Author 1 processing TopSpin Bruker Biospin 2 collection TopSpin Bruker Biospin 3 chemical shift assignment Sparky Goddard 4 peak picking CANDID Herrmann, Guntert and Wuthrich 5 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 6 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman