☰ Navigation Tabs
Complex of neuraminidase from H1N1 influenza virus with tamiphosphor monomethyl ester
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 291 0.1 M HEPES, pH 7.75, 5% PEG 8000
Crystal Properties Matthews coefficient Solvent content 2.83 56.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 118.583 α = 90 b = 137.408 β = 90 c = 118.451 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2015-09-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 0.918409 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.61 44.89 98.2 0.095 0.997 10.29 3.13 121339 22.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.61 1.71 96.4 0.645 0.758 1.88 2.79
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.61 44.89 119520 1821 98.17 0.17826 0.17785 0.1901 0.20485 0.2174 RANDOM 17.716
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.07 1.14 -1.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.642 r_dihedral_angle_4_deg 13.346 r_dihedral_angle_3_deg 12.725 r_dihedral_angle_1_deg 7.273 r_long_range_B_refined 3.796 r_angle_other_deg 3.79 r_long_range_B_other 3.534 r_scangle_other 2.52 r_scbond_it 1.655 r_scbond_other 1.652
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.642 r_dihedral_angle_4_deg 13.346 r_dihedral_angle_3_deg 12.725 r_dihedral_angle_1_deg 7.273 r_long_range_B_refined 3.796 r_angle_other_deg 3.79 r_long_range_B_other 3.534 r_scangle_other 2.52 r_scbond_it 1.655 r_scbond_other 1.652 r_angle_refined_deg 1.636 r_mcangle_other 1.381 r_mcangle_it 1.38 r_mcbond_it 0.961 r_mcbond_other 0.959 r_chiral_restr 0.104 r_bond_refined_d 0.014 r_gen_planes_other 0.012 r_gen_planes_refined 0.009 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5984 Nucleic Acid Atoms Solvent Atoms 824 Heterogen Atoms 249
Software Software Software Name Purpose REFMAC refinement XDS data reduction MOLREP phasing PDB_EXTRACT data extraction XDS data scaling