6FVC
Protein environment affects the water-tryptophan binding mode. Molecular dynamics simulations of Engrailed homeodomain mutants
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
2 | 2D 1H-1H NOESY | 1 mM EnHD_K52E | 90% H2O/10% D2O | 150 mM | 5.7 | 1 atm | 298 | Bruker AVANCE III 850 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 850 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | three representative structures for the conformational equilibrium along the torsion angle N-CA-CB-CG of asparagine N51 |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 3 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
4 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
3 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
1 | chemical shift assignment | Sparky | Goddard | |
2 | peak picking | Sparky | Goddard |