☰ Navigation Tabs
Crystal structure of BAZ2A PHD zinc finger in complex with H3 10-mer AA mutant peptide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 291 2.2-2.4 M sodium/potassium phosphate
Crystal Properties Matthews coefficient Solvent content 2.24 45.06
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.719 α = 90 b = 72.719 β = 90 c = 99.894 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 6M 2017-05-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.9763 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 45.72 99.9 0.09 0.997 14 9.7 18751
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.05 0.58
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2 45.72 17759 955 99.79 0.19525 0.19381 0.22255 0.2333 RANDOM 37.622
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.57 0.57 -1.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.755 r_dihedral_angle_4_deg 14.469 r_dihedral_angle_3_deg 10.409 r_dihedral_angle_1_deg 5.113 r_long_range_B_refined 5.057 r_long_range_B_other 5.055 r_angle_refined_deg 1.264 r_mcangle_it 1.243 r_mcangle_other 1.243 r_angle_other_deg 1.057
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.755 r_dihedral_angle_4_deg 14.469 r_dihedral_angle_3_deg 10.409 r_dihedral_angle_1_deg 5.113 r_long_range_B_refined 5.057 r_long_range_B_other 5.055 r_angle_refined_deg 1.264 r_mcangle_it 1.243 r_mcangle_other 1.243 r_angle_other_deg 1.057 r_scangle_other 0.968 r_mcbond_it 0.685 r_mcbond_other 0.685 r_scbond_it 0.556 r_scbond_other 0.556 r_chiral_restr 0.063 r_bond_refined_d 0.007 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1728 Nucleic Acid Atoms Solvent Atoms 177 Heterogen Atoms 29
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling REFMAC phasing