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E. coli surface display of streptavidin for directed evolution of an allylic deallocase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4 293 2.0 M ammonium sulfate, 0.1 M sodium acetate, pH 4.0
Crystal Properties Matthews coefficient Solvent content 2.31 46.74
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.722 α = 90 b = 57.722 β = 90 c = 183.615 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 2M 2016-11-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06DA 1.0000 SLS X06DA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.64 45.8 98.3 26.9 15.7 19391
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.64 1.66
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.64 45.8 18415 952 98.06 0.12208 0.12016 0.1209 0.15905 0.1612 RANDOM 26.139
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.33 -0.33 0.65
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.985 r_sphericity_free 28.615 r_dihedral_angle_4_deg 21.073 r_sphericity_bonded 15.088 r_dihedral_angle_3_deg 13.444 r_long_range_B_refined 10.106 r_scbond_it 7.006 r_dihedral_angle_1_deg 6.945 r_rigid_bond_restr 6.067 r_scangle_other 5.993
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.985 r_sphericity_free 28.615 r_dihedral_angle_4_deg 21.073 r_sphericity_bonded 15.088 r_dihedral_angle_3_deg 13.444 r_long_range_B_refined 10.106 r_scbond_it 7.006 r_dihedral_angle_1_deg 6.945 r_rigid_bond_restr 6.067 r_scangle_other 5.993 r_long_range_B_other 5.983 r_scbond_other 5.783 r_mcangle_it 4.65 r_mcangle_other 4.646 r_mcbond_it 3.986 r_mcbond_other 3.96 r_angle_refined_deg 2.312 r_angle_other_deg 1.192 r_chiral_restr 0.144 r_bond_refined_d 0.03 r_gen_planes_refined 0.011 r_gen_planes_other 0.003 r_bond_other_d 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 934 Nucleic Acid Atoms Solvent Atoms 79 Heterogen Atoms 41
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling REFMAC phasing