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Solution Structure of Rhabdopeptide NRPS Docking Domain Kj12A-NDD
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 500 uM [U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 600 2 3D HNCACB 1 mM [U-13C; U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 800 3 3D HNCO 1 mM [U-13C; U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 800 4 3D HN(CA)CO 1 mM [U-13C; U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 800 5 3D HCCH-TOCSY 1 mM [U-13C; U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 800 10 3D HCCH-TOCSY 1 mM [U-13C; U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 800 9 3D 1H-15N NOESY 500 uM [U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 600 8 2D 1H-13C HSQC aliphatic 1 mM [U-13C; U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 950 7 3D 1H-13C NOESY aliphatic 1 mM [U-13C; U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 950 6 2D 1H-13C HSQC aromatic 1 mM [U-13C; U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 600 11 3D 1H-13C NOESY aromatic 1 mM [U-13C; U-15N] Kj12A NDD 90% H2O/10% D2O 100 mM 6.5 AMBIENT Pa 293 Bruker AVANCE 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Bruker AVANCE 600 4 Bruker AVANCE 950 3 Bruker AVANCE 600
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (minimized average structure)
Computation: NMR Software # Classification Version Software Name Author 1 structure calculation CYANA 3.97 Guentert 2 processing TopSpin 3.97 Bruker Biospin 3 chemical shift assignment CARA Keller and Wuthrich 4 data analysis CcpNmr Analysis CCPN 5 peak picking CANDID Herrmann, Guntert and Wuthrich 6 refinement OPALp