6EE9
Cytokine-like Peptide Stress-response Peptide-1 from Manduca Sexta
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 1.8 mM Stress-response Peptide-1 | 90% H2O/10% D2O | 2.7 | 1 atm | 298 | Varian UNITY 500 | |
2 | 2D DQF-COSY | 1.8 mM Stress-response Peptide-1 | 90% H2O/10% D2O | 2.7 | 1 atm | 298 | Varian UNITY 500 | |
3 | 2D 1H-1H NOESY | 1.8 mM Stress-response Peptide-1 | 90% H2O/10% D2O | 2.7 | 1 atm | 298 | Varian UNITY 500 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 3.2a | Varian |
2 | processing | VNMR | 3.2a | Varian |
3 | peak picking | CcpNMR | 2.4 | CCPN |
4 | chemical shift assignment | Analysis | 2.4 | CCPN |
5 | refinement | CNS | 1.3 | Brunger, Adams, Clore, Gros, Nilges and Read |
6 | refinement | ProcheckNMR | Laskowski and MacArthur | |
7 | structure calculation | CNS | 1.3 | Brunger, Adams, Clore, Gros, Nilges and Read |