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Pheromone from Euplotes raikovi, Er-1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 3.5 290 0.1 M to 0.2 M (NH4)2SO4, 0.05 M Na Citrate pH 3.5 and 6% (v/v) ethanol, using 5-ul protein drops and 5 ul of reservoir solution
Crystal Properties Matthews coefficient Solvent content 1.47 16.31
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.44 α = 90 b = 22.56 β = 110.57 c = 23.01 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2015-02-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 0.6192 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.7 25.02 97 0.09503 0.999 9.41 12.3 39777
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.7 0.725 1.63 0.447
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION AB INITIO PHASING THROUGHOUT 0.7 25.02 37789 1989 98.01 0.16632 0.1654 0.175 0.18445 0.1954 RANDOM 7.895
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.18 -0.48 0.43 0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.841 r_sphericity_free 16.28 r_dihedral_angle_3_deg 13.411 r_dihedral_angle_4_deg 13.013 r_dihedral_angle_1_deg 7.38 r_sphericity_bonded 6.312 r_rigid_bond_restr 4.383 r_angle_refined_deg 2.682 r_long_range_B_refined 2.463 r_long_range_B_other 2.463
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.841 r_sphericity_free 16.28 r_dihedral_angle_3_deg 13.411 r_dihedral_angle_4_deg 13.013 r_dihedral_angle_1_deg 7.38 r_sphericity_bonded 6.312 r_rigid_bond_restr 4.383 r_angle_refined_deg 2.682 r_long_range_B_refined 2.463 r_long_range_B_other 2.463 r_scangle_other 2.051 r_mcangle_it 1.873 r_mcangle_other 1.869 r_scbond_it 1.559 r_scbond_other 1.556 r_angle_other_deg 1.528 r_mcbond_it 1.269 r_mcbond_other 1.253 r_chiral_restr 0.119 r_bond_refined_d 0.025 r_gen_planes_refined 0.016 r_bond_other_d 0.004 r_gen_planes_other 0.003 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 303 Nucleic Acid Atoms Solvent Atoms 22 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling SHELX phasing