☰ Navigation Tabs
Caseinolytic protease (ClpP) from Staphylococcus aureus mutant - V7A
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3V5E experimental model PDB 3QWD
Sample Caseinolytic protease from Staphylococcus aureus (V7A)
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK III Cryogen Name ETHANE-PROPANE Sample Vitrification Details Modified Vitrobot
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 324522 Reported Resolution (Å) 3.7 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C2
Map-Model Fitting and Refinement Id 1 (3V5E, 3QWD) Refinement Space REAL Refinement Protocol OTHER Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON III (4k x 4k) Electron Dose (electrons/Å**2) 43
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 75000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION EPU CTF CORRECTION CTFFIND 4 MODEL FITTING Coot 0.8.2 INITIAL EULER ASSIGNMENT cryoSPARC 0.5 FINAL EULER ASSIGNMENT cryoSPARC 0.5 CLASSIFICATION cryoSPARC RECONSTRUCTION cryoSPARC 0.5 MODEL REFINEMENT PHENIX 1.10.1-2155
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 878240