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Direct Activation of the Executioner Domain of MLKL by a Select Repertoire of Inositol Phosphates
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 500 uM [U-13C; U-15N] protein 90% H2O/10% D2O 0 mM 6.8 1 atm 303 Bruker AVANCE II 600 2 3D 1H-15N NOESY 500 uM [U-13C; U-15N] protein 90% H2O/10% D2O 0 mM 6.8 1 atm 303 Bruker AVANCE III 800 3 3D 1H-13C NOESY aliphatic 500 uM [U-13C; U-15N] protein 90% H2O/10% D2O 0 mM 6.8 1 atm 303 Bruker AVANCE III 800 4 3D 1H-13C NOESY aromatic 500 uM [U-13C; U-15N] protein 90% H2O/10% D2O 0 mM 6.8 1 atm 303 Bruker AVANCE III 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE II 600 2 Bruker AVANCE III 800
NMR Refinement Method Details Software torsion angle dynamics CYANA simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CYANA 2.1 Guntert, Mumenthaler and Wuthrich 2 chemical shift assignment CARA 1.9 Keller and Wuthrich 3 structure calculation CYANA 2.1 Guntert, Mumenthaler and Wuthrich 4 peak picking CARA 1.9 Keller and Wuthrich 5 collection TopSpin 3.5 Bruker Biospin 6 refinement CNS 1.3 Brunger, Adams, Clore, Gros, Nilges and Read 7 geometry optimization CNS 1.3 Brunger, Adams, Clore, Gros, Nilges and Read