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Solution structure of the zebrafish granulin AaE
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H TOCSY 0.5 mM zebrafish granulin AaE, 150 mM sodium chloride and 0.2mM EDTA pH 6.8 90%, H2O/10% D2O 90% H2O/10% D2O 150 mM 6.8 760 mmHg 298 Bruker AVANCE 500 2 2D 1H-1H COSY 0.5 mM zebrafish granulin AaE, 150 mM sodium chloride and 0.2mM EDTA pH 6.8 90%, H2O/10% D2O 90% H2O/10% D2O 150 mM 6.8 760 mmHg 298 Bruker AVANCE 500 3 2D 1H-1H NOESY 0.5 mM zebrafish granulin AaE, 150 mM sodium chloride and 0.2mM EDTA pH 6.8 90%, H2O/10% D2O 90% H2O/10% D2O 150 mM 6.8 760 mmHg 298 Bruker AVANCE 800 4 2D 1H-15N HSQC 0.5 mM [U-15N] zebrafish granulin AaE, 10mM sodium phosphate, 150 mM sodium chloride and 0.2mM EDTA pH 6.8 90% H2O/10% D2O 150 mM 6.8 760 mmHg 298 Bruker AVANCE 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 800
NMR Refinement Method Details Software molecular dynamics ARIA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 16 Conformers Submitted Total Number 16 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.0 Brunger et al. 2 refinement ARIA Nilges et al. 3 chemical shift assignment NMRView Johnson et al. 4 peak picking NMRView Johnson et al. 5 structure calculation CNS 1.0 Brunger et al. 6 structure calculation ARIA Nilges et al.