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NMR structure of the Rous sarcoma virus matrix protein (M-domain) in the presence of myo-inositol hexakisphosphate
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-95% 15N] Matrix protein, 50 mM sodium phosphate, 2 mM tcep, 2 mM IP6 95% H2O/5% D2O 0.05 M 6 1 atm 305 Bruker AVANCE II 700 2 2D 1H-13C HSQC 0.5 mM [U-95% 13C; U-95% 15N] Matrix protein, 50 mM sodium phosphate, 2 mM tcep, 2 mM IP6 95% H2O/5% D2O 0.05 M 6 1 atm 305 Bruker AVANCE II 700 3 3D HNCA 0.5 mM [U-95% 13C; U-95% 15N] Matrix protein, 50 mM sodium phosphate, 2 mM tcep, 2 mM IP6 95% H2O/5% D2O 0.05 M 6 1 atm 305 Bruker AVANCE II 700 4 3D HN(CO)CA 0.5 mM [U-95% 13C; U-95% 15N] Matrix protein, 50 mM sodium phosphate, 2 mM tcep, 2 mM IP6 95% H2O/5% D2O 0.05 M 6 1 atm 305 Bruker AVANCE II 700 5 3D HNCACB 0.5 mM [U-95% 13C; U-95% 15N] Matrix protein, 50 mM sodium phosphate, 2 mM tcep, 2 mM IP6 95% H2O/5% D2O 0.05 M 6 1 atm 305 Bruker AVANCE II 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE II 700
NMR Refinement Method Details Software torsion angle dynamics CYANA torsion angle dynamics UNIO
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 80 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 4 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 chemical shift assignment Analysis CCPN 1 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 2 structure calculation UNIO Herrmann