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CRYSTAL STRUCTURE OF RHEB IN COMPLEX WITH COMPOUND NR1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1XTQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 295 19% PEG 1500, 0.1M Na acetate pH 5.0
Crystal Properties Matthews coefficient Solvent content 2.12 42.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.15 α = 68.35 b = 60.14 β = 90.01 c = 66.32 γ = 72.05
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD MARMOSAIC 225 mm CCD 2016-04-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 1.00 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.78 46.37 84.7 0.312 0.441 0.959 2.58 1.989 18856 37.612
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.78 1.83 57.9 0.03 1.958
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1XTQ 2.6 46.37 17913 943 92.1 0.2219 0.2168 0.2221 0.3164 0.3177 RANDOM 36.907
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.79 -0.7 0.17 1.37 0.55 -0.58
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.59 r_dihedral_angle_3_deg 17.91 r_dihedral_angle_4_deg 15.601 r_dihedral_angle_1_deg 8.384 r_angle_refined_deg 1.619 r_angle_other_deg 0.991 r_chiral_restr 0.081 r_bond_refined_d 0.012 r_gen_planes_refined 0.006 r_bond_other_d 0.002
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.59 r_dihedral_angle_3_deg 17.91 r_dihedral_angle_4_deg 15.601 r_dihedral_angle_1_deg 8.384 r_angle_refined_deg 1.619 r_angle_other_deg 0.991 r_chiral_restr 0.081 r_bond_refined_d 0.012 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5349 Nucleic Acid Atoms Solvent Atoms 18 Heterogen Atoms 150
Software Software Software Name Purpose XSCALE data scaling REFMAC refinement PDB_EXTRACT data extraction XDS data reduction MOLREP phasing