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NMR solution structure of Defensin1 from Centruroides limpidus limpidus
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D DQF-COSY .83 mM M2D1 95% H2O/5% D2O 0.1 6.5 1 atm 298 Varian INOVA 500 2 2D 1H-1H TOCSY .83 mM M2D1 95% H2O/5% D2O 0.1 6.5 1 atm 298 Varian INOVA 500 3 2D 1H-1H NOESY .83 mM M2D1 95% H2O/5% D2O 0.1 6.5 1 atm 298 Varian INOVA 500 4 2D 1H-1H NOESY .83 mM M2D1 95% H2O/5% D2O 0.1 6.5 1 atm 298 Varian INOVA 500
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 500
NMR Refinement Method Details Software molecular dynamics Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 500 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 data analysis CARA Keller and Wuthrich 3 chemical shift assignment CARA Keller and Wuthrich 4 chemical shift assignment CYANA Guntert, Mumenthaler and Wuthrich 5 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 6 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman