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Structure of T.fusca AA10A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 294 0.1 M HEPES pH 7.5, 4.3 M Sodium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.07 40.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.228 α = 90 b = 77.228 β = 90 c = 122.346 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD Bruker Platinum 135 HELIOS MIRRORS 2012-07-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER AXS MICROSTAR 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.99 40.78 97.9 0.1548 10.6 11.9 28968
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.99 2.09 90.1 0.6216 1.4 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 2 40.78 27187 1462 98.2 0.16732 0.16408 0.1717 0.22886 0.2315 RANDOM 21.569
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.05 -0.02 -0.05 0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.699 r_dihedral_angle_3_deg 14.66 r_dihedral_angle_4_deg 14.333 r_dihedral_angle_1_deg 6.393 r_long_range_B_refined 4.875 r_long_range_B_other 4.713 r_scangle_other 3.365 r_scbond_it 2.21 r_scbond_other 2.21 r_mcangle_other 2.153
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.699 r_dihedral_angle_3_deg 14.66 r_dihedral_angle_4_deg 14.333 r_dihedral_angle_1_deg 6.393 r_long_range_B_refined 4.875 r_long_range_B_other 4.713 r_scangle_other 3.365 r_scbond_it 2.21 r_scbond_other 2.21 r_mcangle_other 2.153 r_mcangle_it 2.149 r_angle_refined_deg 1.648 r_mcbond_it 1.465 r_mcbond_other 1.455 r_angle_other_deg 1.05 r_chiral_restr 0.107 r_bond_refined_d 0.016 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3015 Nucleic Acid Atoms Solvent Atoms 364 Heterogen Atoms 36
Software Software Software Name Purpose REFMAC refinement Coot model building SHELXS phasing PROTEUM PLUS data collection