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Crystal structure of BhGH81 in complex with laminaro-hexaose
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5T49
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 291 20% PEG 3350, 0.2 M sodium iodide
Crystal Properties Matthews coefficient Solvent content 2.39 48.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 80.91 α = 90 b = 96.14 β = 90 c = 104.79 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-300 2014-05-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 0.9783 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 70.84 93.1 0.102 0.986 10.8 4.5 44790
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.21 87 0.313 0.874 5.6 4.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 5T49 2.1 70.84 42576 2181 92.49 0.1599 0.1577 0.1695 0.2019 0.2097 RANDOM 16.071
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.86 0.62 0.24
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.306 r_dihedral_angle_4_deg 16.155 r_dihedral_angle_3_deg 12.961 r_dihedral_angle_1_deg 6.329 r_mcangle_it 1.478 r_angle_refined_deg 1.448 r_mcbond_it 0.874 r_mcbond_other 0.873 r_angle_other_deg 0.787 r_chiral_restr 0.132
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.306 r_dihedral_angle_4_deg 16.155 r_dihedral_angle_3_deg 12.961 r_dihedral_angle_1_deg 6.329 r_mcangle_it 1.478 r_angle_refined_deg 1.448 r_mcbond_it 0.874 r_mcbond_other 0.873 r_angle_other_deg 0.787 r_chiral_restr 0.132 r_bond_refined_d 0.011 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6004 Nucleic Acid Atoms Solvent Atoms 582 Heterogen Atoms 85
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction