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Human metapneumovirus N0-P complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2WJ8 PDB ENTRY 2WJ8
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 100 MM PCB SYSTEM, PH 7, 25 % POLYETHYLENE GLYCOL 1500, 9 MM 1,2-DIAMINOCYCLOHEXANE SULFATE, 6 MM DILOXANIDE FUROATE, 17 MM FUMARIC ACID, 10 MM SPERMINE, 9 MM SULFAGUANIDINE AND 20 MM HEPES, PH 6.8 (SILVER BULLETS ADDITIVES)
Crystal Properties Matthews coefficient Solvent content 2.13 52
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 40.93 α = 90.97 b = 62.78 β = 96.38 c = 86.71 γ = 108.98
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.86 28.42 94.8 0.06 9.2 1.7 64451 29.37
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.86 1.91 75 0.59 1.1 1.6
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 2WJ8 1.86 28.421 1.96 64443 3203 94.81 0.1729 0.1712 0.172 0.2053 0.2068
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 10.343 f_angle_d 0.951 f_chiral_restr 0.047 f_bond_d 0.007 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5707 Nucleic Acid Atoms Solvent Atoms 587 Heterogen Atoms 1
Software Software Software Name Purpose PHENIX refinement XDS data reduction Aimless data scaling PHASER phasing