☰ Navigation Tabs
Solution structure of human ubiquitin with three alanine mutations in living eukaryotic cells by in-cell NMR spectroscopy
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N SOFAST-HMQC 50 uM [U-100% 13C; U-100% 15N] human ubiquitin with three alanine mutations 1, 50 uM [U-100% 15N] human ubiquitin with three alanine mutations 2 90% H2O/10% D2O 0 0 AMBIENT atm 300 Bruker AVANCE III 600 2 2D 1H-13C HSQC 50 uM [U-100% 13C; U-100% 15N] human ubiquitin with three alanine mutations 1, 50 uM [U-100% 15N] human ubiquitin with three alanine mutations 2 90% H2O/10% D2O 0 0 AMBIENT atm 300 Bruker AVANCE III 600 3 3D 1H-15N NOESY 50 uM [U-100% 13C; U-100% 15N] human ubiquitin with three alanine mutations 1, 50 uM [U-100% 15N] human ubiquitin with three alanine mutations 2 90% H2O/10% D2O 0 0 AMBIENT atm 300 Bruker AVANCE III 600 4 3D 1H-13C NOESY 50 uM [U-100% 13C; U-100% 15N] human ubiquitin with three alanine mutations 1, 50 uM [U-100% 15N] human ubiquitin with three alanine mutations 2 90% H2O/10% D2O 0 0 AMBIENT atm 300 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software torsion angle dynamics OPAL
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 4400 Conformers Submitted Total Number 20 Representative Model 1 (target function)
Computation: NMR Software # Classification Version Software Name Author 1 refinement OPAL 1.4 Luginbuhl, Guntert, Billeter and Wuthrich 2 processing Azara 2.8.1 Boucher 3 structure calculation CYANA 3.98 Guntert, Mumenthaler and Wuthrich 4 chemical shift assignment CcpNmr Analysis 2.4.2 CCPN 5 peak picking CcpNmr Analysis 2.4.2 CCPN 6 collection TopSpin Bruker Biospin