solution structure of SMAP-18
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H TOCSY | 10 mM NA-Na,P,O,H sodium phosphate, 2.0 mM NA-C,O,N,H protein solution, 50 mM NA-Na,Cl sodium chloride, 50 % v/v [U-2H] TFE, 10 % v/v [U-2H] H2O | trifluoroethanol/water | 50 mM | 6 | 1 atm | 298 | Bruker AVANCE 600 |
| 2 | 2D DQF-COSY | 10 mM NA-Na,P,O,H sodium phosphate, 2.0 mM NA-C,O,N,H protein solution, 50 mM NA-Na,Cl sodium chloride, 50 % v/v [U-2H] TFE, 10 % v/v [U-2H] H2O | trifluoroethanol/water | 50 mM | 6 | 1 atm | 298 | Bruker AVANCE 600 |
| 3 | 2D 1H-1H NOESY | 10 mM NA-Na,P,O,H sodium phosphate, 2.0 mM NA-C,O,N,H protein solution, 50 mM NA-Na,Cl sodium chloride, 50 % v/v [U-2H] TFE, 10 % v/v [U-2H] H2O | trifluoroethanol/water | 50 mM | 6 | 1 atm | 298 | Bruker AVANCE 600 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (target function) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 2 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
| 3 | peak picking | NMRView | Johnson, One Moon Scientific | |
| 4 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
