☰ Navigation Tabs
Solution structure of LysM domain from a chitinase derived from Volvox carteri
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 360 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 90% H2O/10% D2O 20 mM 5.0 1 atm 189 Bruker AVANCE III 500 2 3D HNCO 360 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 90% H2O/10% D2O 20 mM 5.0 1 atm 189 Bruker AVANCE III 500 3 3D HNCACO 360 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 90% H2O/10% D2O 20 mM 5.0 1 atm 189 Bruker AVANCE III 500 4 3D CBCA(CO)NH 360 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 90% H2O/10% D2O 20 mM 5.0 1 atm 189 Bruker AVANCE III 500 5 3D HNCACB 360 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 90% H2O/10% D2O 20 mM 5.0 1 atm 189 Bruker AVANCE III 500 7 3D HBHACBCACONH 360 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 90% H2O/10% D2O 20 mM 5.0 1 atm 189 Bruker AVANCE III 500 8 3D 1H-15N NOESY 360 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 90% H2O/10% D2O 20 mM 5.0 1 atm 189 Bruker AVANCE III 500 14 3D 1H-15N TOCSY 360 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 90% H2O/10% D2O 20 mM 5.0 1 atm 189 Bruker AVANCE III 500 10 2D 1H-13C HSQC 267 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 100% D2O 20 mM 5.0 1 atm 300 Bruker AVANCE III 500 6 3D 1H-13C NOESY 267 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 100% D2O 20 mM 5.0 1 atm 300 Bruker AVANCE III 500 12 3D HCCH-TOCSY 267 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 100% D2O 20 mM 5.0 1 atm 300 Bruker AVANCE III 500 13 3D CCH-TOCSY 267 uM [U-13C; U-15N] LysM, 20 mM [U-2H] sodium acetate 100% D2O 20 mM 5.0 1 atm 300 Bruker AVANCE III 500
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 500
NMR Refinement Method Details Software simulated annealing CYANA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (target function)
Computation: NMR Software # Classification Version Software Name Author 5 collection TopSpin Bruker Biospin 6 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 7 processing NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 1 refinement CYANA Guntert P. 4 peak picking Sparky Goddard 3 chemical shift assignment Sparky Goddard 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich