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Crystal structure of T2R-TTL bound with PO-7
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.7 293 6% polyethylene glycol 4000, 8% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, PH 6.7
Crystal Properties Matthews coefficient Solvent content 3.11 60.49
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 105.251 α = 90 b = 157.375 β = 90 c = 182.467 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2016-12-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 0.97915 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.99 119.17 99.8 4.2 78443
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.99 119.17 74511 3119 97.29 0.22401 0.22177 0.2214 0.26609 0.2636 RANDOM 59.595
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.56 0.15 -0.71
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.776 r_dihedral_angle_3_deg 14.141 r_dihedral_angle_4_deg 11.984 r_dihedral_angle_1_deg 5.841 r_long_range_B_refined 5.602 r_long_range_B_other 5.602 r_mcangle_it 3.629 r_mcangle_other 3.629 r_scangle_other 3.191 r_mcbond_it 2.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.776 r_dihedral_angle_3_deg 14.141 r_dihedral_angle_4_deg 11.984 r_dihedral_angle_1_deg 5.841 r_long_range_B_refined 5.602 r_long_range_B_other 5.602 r_mcangle_it 3.629 r_mcangle_other 3.629 r_scangle_other 3.191 r_mcbond_it 2.11 r_mcbond_other 2.11 r_scbond_it 1.798 r_scbond_other 1.798 r_angle_refined_deg 1.272 r_angle_other_deg 0.898 r_chiral_restr 0.084 r_bond_refined_d 0.008 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 17019 Nucleic Acid Atoms Solvent Atoms 70 Heterogen Atoms 240
Software Software Software Name Purpose REFMAC refinement SCALEPACK data reduction DM model building SHARP model building DENZO data collection SHELXD model building