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Acetyl xylan esterase from Aspergillus awamori
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 298 21-22.5% PEG 8000, 0.1M MES-NaOH (pH 5.0), 0.2M calcium acetate, 5% MPD
Crystal Properties Matthews coefficient Solvent content 2.51 50.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 174.151 α = 90 b = 174.151 β = 90 c = 50.708 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4r 2007-11-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-6A 1.000 Photon Factory BL-6A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 87.08 98.1 0.071 16.4 3.3 44285
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.97 95.5 0.359 2.5 3 4308
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.9 87.08 42045 2238 98.12 0.15257 0.15082 0.1581 0.18471 0.1938 RANDOM 22.125
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.061 r_dihedral_angle_3_deg 12.223 r_dihedral_angle_4_deg 7.467 r_dihedral_angle_1_deg 6.129 r_long_range_B_refined 3.898 r_angle_other_deg 3.865 r_long_range_B_other 3.689 r_scangle_other 2.517 r_scbond_it 1.835 r_scbond_other 1.835
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.061 r_dihedral_angle_3_deg 12.223 r_dihedral_angle_4_deg 7.467 r_dihedral_angle_1_deg 6.129 r_long_range_B_refined 3.898 r_angle_other_deg 3.865 r_long_range_B_other 3.689 r_scangle_other 2.517 r_scbond_it 1.835 r_scbond_other 1.835 r_mcangle_other 1.582 r_mcangle_it 1.577 r_angle_refined_deg 1.522 r_mcbond_it 1.15 r_mcbond_other 1.139 r_chiral_restr 0.105 r_gen_planes_other 0.018 r_bond_refined_d 0.016 r_gen_planes_refined 0.009 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4148 Nucleic Acid Atoms Solvent Atoms 510 Heterogen Atoms 96
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling SOLVE phasing