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Thermus aquaticus variable protein (TaqVP) from diversity-generating retroelements (DGR)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 15% (w/v) 2-methyl-2,4-pentanediol, 20 mm CaCl2, 100 mM Sodium Acetate (pH 4.6)
Crystal Properties Matthews coefficient Solvent content 4.32 71.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 155.039 α = 90 b = 155.039 β = 90 c = 202.394 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2014-11-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.979 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.81 134.27 100 0.98 12.5 7.4 132418
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD FREE R-VALUE 2.81 80.814 1.33 128585 3829 99.86 0.1793 0.1778 0.1871 0.2287 0.231
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.072 f_angle_d 1.224 f_chiral_restr 0.051 f_bond_d 0.009 f_plane_restr 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11381 Nucleic Acid Atoms Solvent Atoms 164 Heterogen Atoms 128
Software Software Software Name Purpose PHENIX refinement MOSFLM data reduction SOLVE phasing