☰ Navigation Tabs
Ocellatin-F1, solution structure in TFE by NMR spectroscopy
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H TOCSY 2.0 mM Ocellatin-F1, 1.0 mM DSS, 20 mM potassium phosphate, 60 % d2 TFE, 40 % H2O trifluoroethanol/water null 7 Ambient 293.15 Bruker AVANCE III 600 2 2D 1H-1H NOESY 2.0 mM Ocellatin-F1, 1.0 mM DSS, 20 mM potassium phosphate, 60 % d2 TFE, 40 % H2O trifluoroethanol/water null 7 Ambient 293.15 Bruker AVANCE III 600 3 2D 1H-15N HSQC 2.0 mM Ocellatin-F1, 1.0 mM DSS, 20 mM potassium phosphate, 60 % d2 TFE, 40 % H2O trifluoroethanol/water null 7 Ambient 293.15 Bruker AVANCE III 600 4 2D 1H-13C HSQC 2.0 mM Ocellatin-F1, 1.0 mM DSS, 20 mM potassium phosphate, 60 % d2 TFE, 40 % H2O trifluoroethanol/water null 7 Ambient 293.15 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment NMRView Johnson, One Moon Scientific 8 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 collection XwinNMR Bruker Biospin 3 data analysis Procheck Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton 4 data analysis MOLMOL Koradi, Billeter and Wuthrich 5 refinement X-PLOR NIH 2.27 Schwieters, Kuszewski, Tjandra and Clore 6 structure calculation X-PLOR NIH 2.27 Schwieters, Kuszewski, Tjandra and Clore 7 geometry optimization X-PLOR NIH 2.27 Schwieters, Kuszewski, Tjandra and Clore