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Solution structure of the zinc fingers 1 and 2 of MBNL1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCA 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 2 3D HNCACB 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 3 3D CBCA(CO)NH 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 4 3D HNCO 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 5 2D 1H-15N HSQC 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 900 6 2D 1H-13C HSQC 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 7 3D HNHA 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 600 8 3D HNHB 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 600 9 HACAHB-COSY 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 11 (H)C(CO)NH-TOCSY 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 12 H(C)(CO)NH-TOCSY 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 10 HCCH-TOCSY 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 14 (HB)CB(CGCD)HD 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 13 (HB)CB(CGCDCE)HE 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 16 3D 1H-15N NOESY 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800 15 3D 1H-13C NOESY 0.4 mM [U-98% 13C; U-98% 15N] Zinc fingers 1 and 2 of MBNL1 90% H2O/10% D2O 50 mM NaCl mM 7.0 1 atm 298 Bruker AVANCE 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800 3 Bruker AVANCE 900
NMR Refinement Method Details Software simulated annealing Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 geometry optimization TALOS Cornilescu, Delaglio and Bax 4 chemical shift assignment Sparky Goddard 5 data analysis NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 6 data analysis NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax