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Crystal structure of BuGH2Cwt
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4CU6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 291 0.2 M magnesium sulfate, 0.1 M Tris-HCl, 20 % PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.72 54.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 75.14 α = 70.9 b = 121.35 β = 87.47 c = 124.52 γ = 78.96
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-300 2015-03-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 1.000 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 117.64 97.8 0.121 0.935 5.7 2.2 137926
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.64 97.1 0.548 0.298 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 4CU6 2.5 117.64 117397 6086 87.53 0.2108 0.2083 0.2122 0.26 0.2605 RANDOM 30.07
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.03 -0.02 0.02 -0.01 0.02 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.821 r_dihedral_angle_4_deg 14.943 r_dihedral_angle_3_deg 13.625 r_dihedral_angle_1_deg 6.437 r_mcangle_it 1.776 r_angle_refined_deg 1.195 r_mcbond_it 1.013 r_mcbond_other 1.013 r_angle_other_deg 0.884 r_chiral_restr 0.072
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.821 r_dihedral_angle_4_deg 14.943 r_dihedral_angle_3_deg 13.625 r_dihedral_angle_1_deg 6.437 r_mcangle_it 1.776 r_angle_refined_deg 1.195 r_mcbond_it 1.013 r_mcbond_other 1.013 r_angle_other_deg 0.884 r_chiral_restr 0.072 r_bond_refined_d 0.008 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 25963 Nucleic Acid Atoms Solvent Atoms 755 Heterogen Atoms 38
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction