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Single-stranded DNA-binding protein from bacteriophage Enc34
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.5 293 0.1 M Bis-tris methane, 0.3 M MgCl2, 20% PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.16 43.11
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.08 α = 90 b = 67.2 β = 90 c = 76.83 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2013-11-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I911-3 0.97671 MAX II I911-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 30.78 99.4 0.104 0.062 0.989 6.9 3.6 32072
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.58 100 0.77 0.464 0.579 2.5 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.5 30.78 30418 1579 98.99 0.15819 0.1565 0.1562 0.19255 0.192 RANDOM 23.687
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.55 1.95 -2.5
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 31.15 r_dihedral_angle_2_deg 28.542 r_dihedral_angle_4_deg 20.027 r_dihedral_angle_3_deg 12.018 r_rigid_bond_restr 11.983 r_sphericity_bonded 10.162 r_dihedral_angle_1_deg 6.272 r_long_range_B_refined 3.998 r_long_range_B_other 3.768 r_angle_other_deg 3.606
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 31.15 r_dihedral_angle_2_deg 28.542 r_dihedral_angle_4_deg 20.027 r_dihedral_angle_3_deg 12.018 r_rigid_bond_restr 11.983 r_sphericity_bonded 10.162 r_dihedral_angle_1_deg 6.272 r_long_range_B_refined 3.998 r_long_range_B_other 3.768 r_angle_other_deg 3.606 r_scangle_other 3.155 r_mcangle_it 2.762 r_mcangle_other 2.76 r_scbond_it 2.549 r_scbond_other 2.54 r_mcbond_it 2.198 r_mcbond_other 2.189 r_angle_refined_deg 1.571 r_chiral_restr 0.091 r_bond_refined_d 0.012 r_gen_planes_other 0.008 r_gen_planes_refined 0.006 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1424 Nucleic Acid Atoms Solvent Atoms 170 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction SCALA data scaling SHELXD phasing