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Crystal structure of the ferric enterobactin receptor (PfeA) from Pseudomonas aeruginosa in complex with the tris-catechol vector
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 294 PEG 8000 ADA Magnesium acetate pH 6.5
Crystal Properties Matthews coefficient Solvent content 3.4 63.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.697 α = 90 b = 155.171 β = 90 c = 77.796 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2016-02-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.97623 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.57 77.8 99.7 0.046 0.999 22.1 7.3 34110
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.57 2.66 99.3 1.148 0.756 1.5 7.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.57 77.8 32378 1728 99.73 0.22103 0.21881 0.2212 0.26285 0.2638 RANDOM 97.309
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.37 8.31 -4.93
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.292 r_dihedral_angle_4_deg 16.796 r_dihedral_angle_3_deg 15.489 r_long_range_B_refined 10.402 r_long_range_B_other 10.401 r_dihedral_angle_1_deg 7.94 r_scangle_other 7.746 r_mcangle_other 6.465 r_mcangle_it 6.464 r_scbond_it 5.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.292 r_dihedral_angle_4_deg 16.796 r_dihedral_angle_3_deg 15.489 r_long_range_B_refined 10.402 r_long_range_B_other 10.401 r_dihedral_angle_1_deg 7.94 r_scangle_other 7.746 r_mcangle_other 6.465 r_mcangle_it 6.464 r_scbond_it 5.6 r_scbond_other 5.6 r_mcbond_it 4.798 r_mcbond_other 4.797 r_angle_refined_deg 1.409 r_angle_other_deg 0.676 r_chiral_restr 0.087 r_bond_refined_d 0.012 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5421 Nucleic Acid Atoms Solvent Atoms 1 Heterogen Atoms 51
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing