☰ Navigation Tabs
Crystal structure of JAK3 in complex with Compound 4 (FM381)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 277.15 18-25% PEG 3350, 0.1-0.2 M MgCl2 and 0.1 M MES, pH 5.5-6.1
Crystal Properties Matthews coefficient Solvent content 2.01 38.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.029 α = 90 b = 62.45 β = 92.88 c = 51.27 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2016-01-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.97949 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 39.6 99.7 0.073 0.998 11.3 5.9 38357 21.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.55 1.63 99.4 0.722 0.773 2.7 5.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.55 39.6 36379 1930 99.54 0.16557 0.16341 0.1739 0.20443 0.2102 RANDOM 28.241
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.57 0.32 -0.78 2.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.327 r_dihedral_angle_4_deg 16.618 r_dihedral_angle_3_deg 12.992 r_long_range_B_refined 6.408 r_long_range_B_other 6.407 r_dihedral_angle_1_deg 6.007 r_scangle_other 3.043 r_mcangle_it 2.328 r_mcangle_other 2.328 r_scbond_it 1.925
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.327 r_dihedral_angle_4_deg 16.618 r_dihedral_angle_3_deg 12.992 r_long_range_B_refined 6.408 r_long_range_B_other 6.407 r_dihedral_angle_1_deg 6.007 r_scangle_other 3.043 r_mcangle_it 2.328 r_mcangle_other 2.328 r_scbond_it 1.925 r_scbond_other 1.916 r_angle_refined_deg 1.622 r_mcbond_it 1.378 r_mcbond_other 1.376 r_angle_other_deg 0.956 r_chiral_restr 0.108 r_bond_refined_d 0.016 r_gen_planes_refined 0.011 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2312 Nucleic Acid Atoms Solvent Atoms 213 Heterogen Atoms 66
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction SCALA data scaling PHASER phasing