Experiment: 5KWF

X-RAY DIFFRACTION - NEUTRON DIFFRACTION

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION		293	7% PEG 8000, 100mM MnSO4, 100mM cacodylic acid pH 5.2

Crystal Properties
Matthews coefficient	Solvent content
2.12	42.01

Symmetry
Space Group	P 1 21 1

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	neutron	293	IMAGE PLATE	MAATEL IMAGINE		2013-06-01	L	LAUE
2	1	x-ray	293	IMAGE PLATE	RIGAKU RAXIS IV++	Osmic Varimax	2013-07-01	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	NUCLEAR REACTOR	ORNL High Flux Isotope Reactor BEAMLINE CG4D	2.8-4.3	ORNL High Flux Isotope Reactor	CG4D
2	ROTATING ANODE	RIGAKU MICROMAX-007 HF	1.54

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	R Sym I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	R Split (All)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.192	61.593	76.7	0.258	0.258					4	4		17714			12.4
2	1.499	40	91.03							21.1	3.6		67641			12.4

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	R Merge I (Observed)	R-Sym I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	R Split (All)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.2	2.32		0.349						1.9	3.3
1	2.32	2.46		0.335						2.1	3.2
1	2.46	2.63		0.329						2.1	3.3
1	2.63	2.84		0.308						2.2	3.4
1	2.84	3.11		0.28						2.4	3.7
1	3.11	3.48		0.258						2.6	4.2
1	3.48	4.02		0.257						2.5	4.9
1	4.02	4.92		0.243						2.6	5.4
1	4.92	6.96		0.195						3.2	5.1
1	6.96	61.199		0.13						4.5	3.6

Statistics
Diffraction ID	Structure Solution Method	Resolution (High)	Resolution (Low)	Cut-off Sigma (I)	Cut-off Sigma (F)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	1.499	25.264		1.37		67641	3376	91.03		0.1918	0.1904	0.1384	0.2195	0.1642		13.2196
NEUTRON DIFFRACTION	MOLECULAR REPLACEMENT	2.214	61.593				17713	886	76.21		0.2849	0.2835		0.3117

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]

RMS Deviations
Key	Refinement Restraint Deviation
f_dihedral_angle_d	23.11
f_angle_d	1.459
f_chiral_restr	0.134
f_plane_restr	0.036
f_bond_d	0.016

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3834
Nucleic Acid Atoms
Solvent Atoms	435
Heterogen Atoms	88

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5KWF | pdb_00005kwf