☰ Navigation Tabs
Crystal Structure of Inward Rectifier Kir2.2 K62W Mutant In Complex with PIP2
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5KUK
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 293.15 Hepes, KCl, PEG 400
Crystal Properties Matthews coefficient Solvent content 3.85 68.03
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.303 α = 90 b = 81.303 β = 90 c = 183.572 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 PIXEL DECTRIS PILATUS 6M-F 2015-04-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.9792 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 91.95 99.1 0.092 11.65 2.9 14556
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.9 99.9 0.743 0.769 1.67 2.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 5KUK 2.8 91.95 13843 713 99.01 0.20051 0.19757 0.2043 0.25823 0.2618 RANDOM 74.39
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 4.37 4.37 -8.74
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.124 r_dihedral_angle_3_deg 15.859 r_dihedral_angle_4_deg 15.203 r_long_range_B_refined 10.196 r_long_range_B_other 10.147 r_dihedral_angle_1_deg 7.164 r_scangle_other 7.035 r_mcangle_it 6.696 r_mcangle_other 6.694 r_mcbond_it 4.309
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.124 r_dihedral_angle_3_deg 15.859 r_dihedral_angle_4_deg 15.203 r_long_range_B_refined 10.196 r_long_range_B_other 10.147 r_dihedral_angle_1_deg 7.164 r_scangle_other 7.035 r_mcangle_it 6.696 r_mcangle_other 6.694 r_mcbond_it 4.309 r_mcbond_other 4.298 r_scbond_it 4.292 r_scbond_other 4.292 r_angle_refined_deg 1.444 r_angle_other_deg 0.758 r_chiral_restr 0.074 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2612 Nucleic Acid Atoms Solvent Atoms 38 Heterogen Atoms 58
Software Software Software Name Purpose REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling MOLREP phasing