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Solution NMR Structure of Denovo Beta Sheet Design Protein, Northeast Structural Genomics Consortium (NESG) Target OR485
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.80 mM [U-99% 13C; U-99% 15N] OR485 90% H2O/10% D2O 100 mM 7.5 1 atm 298 Bruker AVANCE 800 2 2D 1H-13C HSQC aliphatic 0.80 mM [U-99% 13C; U-99% 15N] OR485 90% H2O/10% D2O 100 mM 7.5 1 atm 298 Bruker AVANCE 800 3 2D 1H-13C HSQC aromatic 0.80 mM [U-99% 13C; U-99% 15N] OR485 90% H2O/10% D2O 100 mM 7.5 1 atm 298 Bruker AVANCE 800 4 3D HNCACB 0.80 mM [U-99% 13C; U-99% 15N] OR485 90% H2O/10% D2O 100 mM 7.5 1 atm 298 Bruker AVANCE 800 5 3D HN(COCA)CB 0.80 mM [U-99% 13C; U-99% 15N] OR485 90% H2O/10% D2O 100 mM 7.5 1 atm 298 Bruker AVANCE 800 6 3D SIMUTANEOUS 13C-AROMATIC, 13-CALIPHATIC,15N EDITED 1H-1H NOESY 0.80 mM [U-99% 13C; U-99% 15N] OR485 90% H2O/10% D2O 100 mM 7.5 1 atm 298 Bruker AVANCE 800 7 3D 13C-AROMATIC NOESY 0.80 mM [U-99% 13C; U-99% 15N] OR485 90% H2O/10% D2O 100 mM 7.5 1 atm 298 Bruker AVANCE 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing, distance geometry, molecular dynamics CNS
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment AutoAssign Zimmerman, Moseley, Kulikowski and Montelione 4 peak picking XEASY Bartels et al. 5 refinement AutoStructure Huang, Tejero, Powers and Montelione 6 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax