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Synechocystis ACO mutant - T136A
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4OU9
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 281 Sodium Chloride, BisTris Propane, Sodium Polyacrylate 2100, Triton X-100
Crystal Properties Matthews coefficient Solvent content 3.48 64.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 118.76 α = 90 b = 124.961 β = 90 c = 203.911 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2015-08-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-E 0.9793 APS 21-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.79 48.61 99.8 7.1 3.7 75385
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 4OU9 2.8 48.61 71847 3538 99.78 0.22699 0.22521 0.2288 0.26371 0.2655 RANDOM 62.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.494 r_dihedral_angle_4_deg 17.849 r_dihedral_angle_3_deg 14.715 r_mcangle_it 6.64 r_dihedral_angle_1_deg 6.573 r_mcbond_it 4.132 r_mcbond_other 4.132 r_angle_refined_deg 1.397 r_angle_other_deg 0.824 r_chiral_restr 0.071
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.494 r_dihedral_angle_4_deg 17.849 r_dihedral_angle_3_deg 14.715 r_mcangle_it 6.64 r_dihedral_angle_1_deg 6.573 r_mcbond_it 4.132 r_mcbond_other 4.132 r_angle_refined_deg 1.397 r_angle_other_deg 0.824 r_chiral_restr 0.071 r_bond_refined_d 0.01 r_gen_planes_refined 0.007 r_gen_planes_other 0.003 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 15090 Nucleic Acid Atoms Solvent Atoms 44 Heterogen Atoms 6
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing