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CryoEM structure of the full virion of a human rhinovirus C
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument GATAN CRYOPLUNGE 3 Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 8973 Reported Resolution (Å) 2.79 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target Correlation coefficient Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 25.7
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 14000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION EMAN2 2.06 PARTICLE SELECTION DoG Picker IMAGE ACQUISITION Leginon 3.1 CTF CORRECTION fitctf2.py MODEL FITTING UCSF Chimera 1.11 MODEL REFINEMENT PHENIX 1.10.1-2155 MODEL REFINEMENT Coot 0.8.2 INITIAL EULER ASSIGNMENT jspr FINAL EULER ASSIGNMENT jspr CLASSIFICATION RELION 1.3 RECONSTRUCTION jspr
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING ONLY CTF correction was performed on the fly during 2D alignment and 3D reconstruction. 24882 A mixed population of empty particles, full particles, and junk