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Streptomyces peucetius CYP105P2 complex with biphenyl compound
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 293 0.1 M Bis-Tris Propane, 0.2 M DL-Malic acid
Crystal Properties Matthews coefficient Solvent content 4.16 70.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 123.023 α = 90 b = 122.941 β = 90.028 c = 193.287 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 270 2015-02-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PAL/PLS BEAMLINE 7A (6B, 6C1) 0.97934 PAL/PLS 7A (6B, 6C1)
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 50 99.5 39.3 6.9 165620
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.1 50 157003 8315 98.91 0.20247 0.20034 0.2083 0.24297 0.2488 RANDOM 48.356
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 -0.01 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.177 r_dihedral_angle_4_deg 20.155 r_dihedral_angle_3_deg 16.292 r_long_range_B_other 8.968 r_long_range_B_refined 8.956 r_scangle_other 7.801 r_dihedral_angle_1_deg 5.835 r_scbond_other 5.519 r_scbond_it 5.518 r_mcangle_it 4.939
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.177 r_dihedral_angle_4_deg 20.155 r_dihedral_angle_3_deg 16.292 r_long_range_B_other 8.968 r_long_range_B_refined 8.956 r_scangle_other 7.801 r_dihedral_angle_1_deg 5.835 r_scbond_other 5.519 r_scbond_it 5.518 r_mcangle_it 4.939 r_mcangle_other 4.939 r_mcbond_it 3.995 r_mcbond_other 3.995 r_angle_refined_deg 1.966 r_angle_other_deg 0.959 r_chiral_restr 0.126 r_bond_refined_d 0.019 r_gen_planes_refined 0.011 r_gen_planes_other 0.009 r_bond_other_d 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 12168 Nucleic Acid Atoms Solvent Atoms 657 Heterogen Atoms 240
Software Software Software Name Purpose REFMAC refinement HKL-2000 data processing HKL-2000 data scaling MOLREP phasing